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Book synopsis

Bioconductor software has become a standard tool for the analysis and comprehension of data from high-throughput genomics experiments. Its application spans a broad field of technologies used in contemporary molecular biology. In this volume, the authors present a collection of cases to apply Bioconductor tools in the analysis of microarray gene expression data. Topics covered include: (1) import and preprocessing of data from various sources; (2) statistical modeling of differential gene expression; (3) biological metadata; (4) application of graphs and graph rendering; (5) machine learning for clustering and classification problems; (6) gene set enrichment analysis.§Each chapter of this book describes an analysis of real data using hands-on example driven approaches. Short exercises help in the learning process and invite more advanced considerations of key topics. The book is a dynamic document. All the code shown can be executed on a local computer, and readers are able to reproduce every computation, figure, and table.

Book details

Book category Books in English Mathematics & science Biology, life sciences

• Full title: Bioconductor Case Studies
• Author: Florian Hahne, Wolfgang Huber, Robert Gentleman
• Language: English
• Binding: Paperback
• Number of pages: 284
• EAN: 9780387772394
• ISBN: 0387772391
• ID: 01382977
• Publisher: Springer-Verlag New York Inc.
• Weight: 526 g
• Dimensions: 237 × 155 × 17 mm
• Date of publishing: 15. August 2008

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